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    Tma7 translation machinery associated 7 homolog [ Rattus norvegicus (Norway rat) ]

    Gene ID: 679747, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tma7provided by RGD
    Official Full Name
    translation machinery associated 7 homologprovided by RGD
    Primary source
    RGD:1584795
    See related
    EnsemblRapid:ENSRNOG00000047225 AllianceGenome:RGD:1584795
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Ccdc72
    Summary
    Orthologous to human TMA7 (translation machinery associated 7 homolog). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Thymus (RPKM 594.5), Adrenal (RPKM 546.2) and 9 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Tma7 in Genome Data Viewer
    Location:
    8q32
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (118604680..118609368, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (109726213..109730902, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (117815725..117820422, complement)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene ATR interacting protein Neighboring gene U2 spliceosomal RNA Neighboring gene coiled-coil domain containing 51 Neighboring gene plexin B1 Neighboring gene cytochrome c oxidase subunit 6C, pseudogene 2 Neighboring gene F-box and WD repeat domain containing 12

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    translation machinery-associated protein 7
    Names
    coiled-coil domain containing 72
    coiled-coil domain-containing protein 72
    translational machinery associated 7 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126048.2NP_001119520.1  translation machinery-associated protein 7

      See identical proteins and their annotated locations for NP_001119520.1

      Status: VALIDATED

      Source sequence(s)
      BC157813, JAXUCZ010000008
      UniProtKB/TrEMBL
      A6I3B4
      Related
      ENSRNOP00000065251.4, ENSRNOT00000075819.4
      Conserved Domains (1) summary
      pfam09072
      Location:364
      TMA7; Translation machinery associated TMA7

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      118604680..118609368 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)