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    SLC18B1 solute carrier family 18 member B1 [ Macaca fascicularis (crab-eating macaque) ]

    Gene ID: 102141294, updated on 10-Oct-2024

    Summary

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    Gene symbol
    SLC18B1
    Gene description
    solute carrier family 18 member B1
    See related
    Ensembl:ENSMFAG00000040844
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca fascicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC18B1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 4 NC_088378.1 (36736169..36766260, complement)
    102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 4 NC_052258.1 (131756126..131786565)

    Chromosome 4 - NC_088378.1Genomic Context describing neighboring genes Neighboring gene vascular non-inflammatory molecule 3-like Neighboring gene vanin 2 Neighboring gene small nucleolar RNA SNORD101 Neighboring gene small nucleolar RNA SNORD100 Neighboring gene ribosomal protein S12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables voltage-gated chloride channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chloride transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MFS-type transporter SLC18B1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T2T-MFA8v1.0

    Genomic

    1. NC_088378.1 Reference T2T-MFA8v1.0

      Range
      36736169..36766260 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005551866.4 → XP_005551923.1  MFS-type transporter SLC18B1 isoform X2

      See identical proteins and their annotated locations for XP_005551923.1

      UniProtKB/TrEMBL
      A0A2K5X0N4
      Conserved Domains (2) summary
      cd06174
      Location:37 → 419
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:41 → 392
      MFS_1; Major Facilitator Superfamily

    2. XM_005551865.4 → XP_005551922.1  MFS-type transporter SLC18B1 isoform X1

      See identical proteins and their annotated locations for XP_005551922.1

      UniProtKB/TrEMBL
      A0A2K5X171, G7P347
      Related
      ENSMFAP00000043031.1
      Conserved Domains (2) summary
      cd06174
      Location:37 → 426
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:41 → 392
      MFS_1; Major Facilitator Superfamily

    3. XM_015448674.3 → XP_015304160.1  MFS-type transporter SLC18B1 isoform X3

      UniProtKB/TrEMBL
      A0A2K5X171
      Conserved Domains (2) summary
      cd06174
      Location:1 → 384
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:1 → 350
      MFS_1; Major Facilitator Superfamily

    4. XM_065543412.1 → XP_065399484.1  MFS-type transporter SLC18B1 isoform X5

    5. XM_065543413.1 → XP_065399485.1  MFS-type transporter SLC18B1 isoform X5

    6. XM_065543411.1 → XP_065399483.1  MFS-type transporter SLC18B1 isoform X4

    7. XM_045391509.2 → XP_045247444.1  MFS-type transporter SLC18B1 isoform X6

    Nucleotide Protein
    Heading Accession and Version

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