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    bidA dethiobiotin synthetase BidA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944927, updated on 3-Dec-2024

    Summary

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    Official Symbol
    bidA
    Official Full Name
    dethiobiotin synthetase BidA
    Primary source
    ECOCYC:G6851
    Locus tag
    b1593
    See related
    ASAP:ABE-0005319
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1588; ynfK
    Summary
    YnfK is 50% identical to paralog BioD. [More information is available at EcoGene: EG13849].
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    Genomic context

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    Sequence:
    NC_000913.3 (1666524..1667219, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative menaquinol dehydrogenase Neighboring gene redox enzyme maturation protein DmsD Neighboring gene putative chloride:H(+) antiporter ClcB Neighboring gene DNA-binding transcriptional repressor Mlc Neighboring gene putative DNA-binding transcriptional regulator YnfL

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A conserved and seemingly redundant Escherichia coli biotin biosynthesis gene expressed only during anaerobic growth. Song X, et al. Mol Microbiol, 2021 Nov. PMID 34597430, Free PMC Article
    2. Identification of pathogen-specific and conserved genes expressed in vivo by an avian pathogenic Escherichia coli strain. Dozois CM, et al. Proc Natl Acad Sci U S A, 2003 Jan 7. PMID 12506201, Free PMC Article
    3. Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. Nonaka G, et al. Genes Dev, 2006 Jul 1. PMID 16818608, Free PMC Article
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A conserved and seemingly redundant Escherichia coli biotin biosynthesis gene expressed only during anaerobic growth.
      Title: A conserved and seemingly redundant Escherichia coli biotin biosynthesis gene expressed only during anaerobic growth.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    dethiobiotin synthetase BidA
    NP_416110.4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1666524..1667219 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416110.4 dethiobiotin synthetase BidA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416110.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A828NVW0
      Conserved Domains (1) summary
      PRK12374
      Location:1 → 231
      PRK12374; ATP-dependent dethiobiotin synthetase BioD
    Nucleotide Protein
    Heading Accession and Version

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