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    yqfB N(4)-acetylcytidine amidohydrolase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947380, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yqfB
    Official Full Name
    N(4)-acetylcytidine amidohydrolase
    Primary source
    ECOCYC:G7513
    Locus tag
    b2900
    See related
    ASAP:ABE-0009518
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2895
    Summary
    A solution structure of YqfB has been determined . [More information is available at EcoCyc: G7513].
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    Genomic context

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    Sequence:
    NC_000913.3 (3043312..3043623, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene folate-binding protein Neighboring gene hemolysin-III family protein YqfA Neighboring gene 6-phospho-beta-glucosidase A Neighboring gene putative oxidoreductase YgfF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. YqfB protein from Escherichia coli: an atypical amidohydrolase active towards N(4)-acylcytosine derivatives. Stanislauskienė R, et al. Sci Rep, 2020 Jan 21. PMID 31964920, Free PMC Article
    2. G-matrix Fourier transform NOESY-based protocol for high-quality protein structure determination. Shen Y, et al. J Am Chem Soc, 2005 Jun 29. PMID 15969587
    3. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables N4-acetylcytidine amidohydrolase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables N4-acetylcytidine amidohydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within pyrimidine nucleoside catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    N(4)-acetylcytidine amidohydrolase
    NP_417376.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3043312..3043623 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417376.1 N(4)-acetylcytidine amidohydrolase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417376.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1PQU7
      Conserved Domains (1) summary
      PRK04980
      Location:2 → 103
      PRK04980; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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