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    pspF DNA-binding transcriptional dual regulator PspF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945683, updated on 3-Dec-2024

    Summary

    Official Symbol
    pspF
    Official Full Name
    DNA-binding transcriptional dual regulator PspF
    Primary source
    ECOCYC:EG12344
    Locus tag
    b1303
    See related
    ASAP:ABE-0004383
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1298; ycjB
    Summary
    The transcription factor PspF, for "Phage shock protein F," is a bacterial enhancer-binding protein required for 54-dependent transcription activation . [More information is available at EcoCyc: EG12344].
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    Genomic context

    Sequence:
    NC_000913.3 (1366935..1367912, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene gamma-glutamylputrescine oxidase Neighboring gene 4-aminobutyrate aminotransferase PuuE Neighboring gene phage shock protein A Neighboring gene phage shock protein B Neighboring gene phage shock protein C

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    part_of protein-DNA complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of transcription regulator complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 

    General protein information

    Preferred Names
    DNA-binding transcriptional dual regulator PspF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1366935..1367912 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415819.4 DNA-binding transcriptional dual regulator PspF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415819.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1QER1, A0A8S7EFZ0
      Conserved Domains (1) summary
      PRK11608
      Location:1325
      pspF; phage shock protein operon transcriptional activator; Provisional