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    Tspyl5 testis-specific protein, Y-encoded-like 5 [ Mus musculus (house mouse) ]

    Gene ID: 239364, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tspyl5provided by MGI
    Official Full Name
    testis-specific protein, Y-encoded-like 5provided by MGI
    Primary source
    MGI:MGI:2442458
    See related
    Ensembl:ENSMUSG00000038984 AllianceGenome:MGI:2442458
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    6330530B20; E130308C19Rik
    Summary
    Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in several processes, including cellular response to gamma radiation; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; and positive regulation of protein ubiquitination. Predicted to be located in chromatin. Predicted to be active in nucleus. Orthologous to human TSPYL5 (TSPY like 5). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Tspyl5 in Genome Data Viewer
    Location:
    15 B3.1; 15 13.91 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (33684021..33688029, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (33683875..33687883, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene carboxypeptidase Q Neighboring gene ribosomal protein L7-like 1 pseudogene Neighboring gene RIKEN cDNA 4930592A05 gene Neighboring gene STARR-seq mESC enhancer starr_38305 Neighboring gene predicted gene, 53872 Neighboring gene STARR-seq mESC enhancer starr_38306 Neighboring gene STARR-seq mESC enhancer starr_38307 Neighboring gene STARR-seq mESC enhancer starr_38308 Neighboring gene STARR-seq mESC enhancer starr_38309 Neighboring gene STARR-seq mESC enhancer starr_38310 Neighboring gene STARR-seq mESC enhancer starr_38312 Neighboring gene STARR-seq mESC enhancer starr_38313 Neighboring gene STARR-seq mESC enhancer starr_38315 Neighboring gene predicted gene, 41290 Neighboring gene predicted gene 9643

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables chromatin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in chromatin IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    testis-specific Y-encoded-like protein 5
    Names
    TSPY-like protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001085421.1NP_001078890.1  testis-specific Y-encoded-like protein 5

      See identical proteins and their annotated locations for NP_001078890.1

      Status: VALIDATED

      Source sequence(s)
      AC129208, BC079547, BY715454, BY721490
      Consensus CDS
      CCDS49591.1
      UniProtKB/Swiss-Prot
      Q69ZB3
      Related
      ENSMUSP00000045542.4, ENSMUST00000042021.5
      Conserved Domains (1) summary
      cl08298
      Location:217367
      NAP; Nucleosome assembly protein (NAP)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      33684021..33688029 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)