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    tatdn2 TatD DNase domain containing 2 [ Danio rerio (zebrafish) ]

    Gene ID: 557931, updated on 9-Dec-2024

    Summary

    Official Symbol
    tatdn2provided by ZNC
    Official Full Name
    TatD DNase domain containing 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-081022-51
    See related
    Ensembl:ENSDARG00000070618 AllianceGenome:ZFIN:ZDB-GENE-081022-51
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:194021
    Summary
    Predicted to enable hydrolase activity, acting on ester bonds. Orthologous to human TATDN2 (TatD DNase domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See tatdn2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (40439922..40449525, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (40442386..40451988, complement)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 174 Neighboring gene ghrelin/obestatin prepropeptide Neighboring gene von Hippel-Lindau tumor suppressor Neighboring gene cereblon

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    putative deoxyribonuclease TATDN2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001128693.1NP_001122165.1  putative deoxyribonuclease TATDN2

      See identical proteins and their annotated locations for NP_001122165.1

      Status: PROVISIONAL

      Source sequence(s)
      BC162648
      UniProtKB/TrEMBL
      B3DH59
      Related
      ENSDARP00000094655.2, ENSDART00000103879.4
      Conserved Domains (1) summary
      pfam01026
      Location:412677
      TatD_DNase; TatD related DNase

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      40439922..40449525 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005166044.5XP_005166101.1  putative deoxyribonuclease TATDN2 isoform X1

      See identical proteins and their annotated locations for XP_005166101.1

      UniProtKB/TrEMBL
      A0A8M2BDK8, F1QY16
      Related
      ENSDARP00000143970.1, ENSDART00000179469.2
      Conserved Domains (1) summary
      pfam01026
      Location:412677
      TatD_DNase; TatD related DNase
    2. XM_005166043.4XP_005166100.1  putative deoxyribonuclease TATDN2 isoform X1

      See identical proteins and their annotated locations for XP_005166100.1

      UniProtKB/TrEMBL
      A0A8M2BDK8, F1QY16
      Conserved Domains (1) summary
      pfam01026
      Location:412677
      TatD_DNase; TatD related DNase