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    pcp4b Purkinje cell protein 4b [ Danio rerio (zebrafish) ]

    Gene ID: 386963, updated on 4-Jan-2025

    Summary

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    Official Symbol
    pcp4bprovided by ZNC
    Official Full Name
    Purkinje cell protein 4bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-031118-117
    See related
    AllianceGenome:ZFIN:ZDB-GENE-031118-117
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fv02d03; wu:fv02d03
    Summary
    Orthologous to human PCP4 (Purkinje cell protein 4). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    human mouse all
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    Genomic context

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    See pcp4b in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (6058457..6119635)

    Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene SH3 domain binding glutamate-rich protein Neighboring gene immunoglobulin superfamily, member 5b Neighboring gene Down syndrome cell adhesion molecule b Neighboring gene beta-secretase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007126.7 Chromosome 15 Reference GRCz11 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Expression of pcp4a in subpopulations of CNS neurons in zebrafish. Mione M, et al. J Comp Neurol, 2006 Apr 20. PMID 16506201
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    4. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    calmodulin regulator protein PCP4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007126.7 Reference GRCz11 Primary Assembly

      Range
      6058457..6119635
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021466313.2 → XP_021321988.1  calmodulin regulator protein PCP4

      UniProtKB/TrEMBL
      A0A8M9P729
    Nucleotide Protein Strain
    Heading Accession and Version

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