foxred1 FAD-dependent oxidoreductase domain containing 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: foxred1provided by ZNC
Official Full Name: FAD-dependent oxidoreductase domain containing 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-080204-64
See related: Ensembl:ENSDARG00000099705 AllianceGenome:ZFIN:ZDB-GENE-080204-64
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:172243
Summary: Predicted to be involved in mitochondrial respiratory chain complex I assembly. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 19. Orthologous to human FOXRED1 (FAD dependent oxidoreductase domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	10	NC_007121.7 (39249035..39267444)
105	previous assembly	GRCz10 (GCF_000002035.5)	10	NC_007121.6 (39325838..39351721)

Chromosome 10 - NC_007121.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in mitochondrial respiratory chain complex I assembly	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: FAD-dependent oxidoreductase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001113578.1 → NP_001107050.1 FAD-dependent oxidoreductase domain-containing protein 1

See identical proteins and their annotated locations for NP_001107050.1

Status: PROVISIONAL

Source sequence(s)

BC154609

UniProtKB/TrEMBL

A8WG78

Related

ENSDARP00000132769.1, ENSDART00000167974.2

Conserved Domains (1) summary

COG0665
Location:83 → 476

DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]