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    creb3l4 cAMP responsive element binding protein 3-like 4 [ Danio rerio (zebrafish) ]

    Gene ID: 100333318, updated on 4-Jan-2025

    Summary

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    Official Symbol
    creb3l4provided by ZNC
    Official Full Name
    cAMP responsive element binding protein 3-like 4provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-403
    See related
    AllianceGenome:ZFIN:ZDB-GENE-030131-403
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb26f10; wu:fb26f10
    Summary
    Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be located in endoplasmic reticulum membrane and nucleus. Orthologous to human CREB3L4 (cAMP responsive element binding protein 3 like 4). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    all
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    Genomic context

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    See creb3l4 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (54503858..54508739, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (54681179..54690349, complement)

    Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 11, subfamily C, polypeptide 1 Neighboring gene CDC-like kinase 2b Neighboring gene frizzled class receptor 6 Neighboring gene uncharacterized LOC137487998

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein creb3l4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007127.7 Reference GRCz11 Primary Assembly

      Range
      54503858..54508739 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021466785.2 → XP_021322460.2  uncharacterized protein creb3l4

    Nucleotide Protein Strain
    Heading Accession and Version

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