cd82a CD82 molecule a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cd82aprovided by ZNC
Official Full Name: CD82 molecule aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-2818
See related: Ensembl:ENSDARG00000019098 AllianceGenome:ZFIN:ZDB-GENE-030131-2818
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fc18f11; zgc:73292; zgc:77871; id:ibd2867; wu:fc18f11; wu:fk50g10; wu:fp72a01; xx:fp72a01
Summary: Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in central nervous system; otic vesicle; pectoral fin; and yolk syncytial layer. Orthologous to human CD82 (CD82 molecule). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 7

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (26709248..26738122)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (26438078..26466929)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fc13d01.x1 (e-PCR)
- UniSTS:203801

fc18f11.y1 (e-PCR)
- UniSTS:192886

fk50g10.x1 (e-PCR)
- UniSTS:201097

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: CD82 molecule a

Names: CD82 antigen, a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_212661.2 → NP_997826.2 CD82 molecule a

Status: VALIDATED

Source sequence(s)

CR394555, CT573817, EH583033

UniProtKB/TrEMBL

A0A8M9Q171, F1Q6P4

Related

ENSDARP00000124595.1, ENSDART00000149426.3

Conserved Domains (1) summary

cd03160
Location:106 → 218

CD37_CD82_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...