metap1d methionyl aminopeptidase type 1D (mitochondrial) [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: metap1dprovided by ZNC
Official Full Name: methionyl aminopeptidase type 1D (mitochondrial)provided by ZNC
Primary source: ZFIN:ZDB-GENE-050522-71
See related: Ensembl:ENSDARG00000019715 AllianceGenome:ZFIN:ZDB-GENE-050522-71
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: map1d; MAP 1D; MetAP 1D; zgc:110461
Summary: Predicted to enable metalloaminopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be active in mitochondrion. Orthologous to human METAP1D (methionyl aminopeptidase type 1D, mitochondrial). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	1	NC_007112.7 (30946232..30974165)
105	previous assembly	GRCz10 (GCF_000002035.5)	1	NC_007112.6 (30142301..30170234)

Chromosome 1 - NC_007112.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables aminopeptidase activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables initiator methionyl aminopeptidase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables metalloaminopeptidase activity	IBA Inferred from Biological aspect of Ancestor more info
enables metalloaminopeptidase activity	IEA Inferred from Electronic Annotation more info
enables peptidase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within proteolysis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	ISS Inferred from Sequence or Structural Similarity more info

General protein information

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Preferred Names: methionine aminopeptidase 1D, mitochondrial

Names: metAP 1D

NP_001019563.1

EC 3.4.11.18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001024392.1 → NP_001019563.1 methionine aminopeptidase 1D, mitochondrial precursor

See identical proteins and their annotated locations for NP_001019563.1

Status: PROVISIONAL

Source sequence(s)

BC095283

UniProtKB/Swiss-Prot

Q4VBS4

Related

ENSDARP00000010471.6, ENSDART00000022841.8

Conserved Domains (2) summary

PRK12318
Location:63 → 334

PRK12318; methionine aminopeptidase; Provisional

cd01086
Location:97 → 333

MetAP1; Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.