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    mgarpb mitochondria localized glutamic acid rich protein b [ Danio rerio (zebrafish) ]

    Gene ID: 100002387, updated on 9-Dec-2024

    Summary

    Official Symbol
    mgarpbprovided by ZNC
    Official Full Name
    mitochondria localized glutamic acid rich protein bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-130530-930
    See related
    AllianceGenome:ZFIN:ZDB-GENE-130530-930
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    mgarp
    Summary
    Predicted to act upstream of or within anterograde axonal transport. Predicted to be located in mitochondrion. Orthologous to human MGARP (mitochondria localized glutamic acid rich protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See mgarpb in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (13997131..14014743, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (13311786..13328423, complement)

    Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137489979 Neighboring gene nocturnin b Neighboring gene E74-like factor 2b (ets domain transcription factor) Neighboring gene histone PARylation factor 1 Neighboring gene ankyrin 2a, neuronal Neighboring gene uncharacterized LOC101887098

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    protein MGARP
    Names
    mitochondria-localized glutamic acid-rich protein
    zmp:0000000927

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007112.7 Reference GRCz11 Primary Assembly

      Range
      13997131..14014743 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003197634.6XP_003197682.1  protein MGARP

      UniProtKB/TrEMBL
      A0A8M1RSA4, A0A8M2B6I0
      Conserved Domains (1) summary
      pfam14962
      Location:1157
      AIF-MLS; Mitochondria Localization Sequence

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394465.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      199725..215137 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021471118.2XP_021326793.1  protein MGARP

      UniProtKB/TrEMBL
      A0A8M9P7S5, A0A8M9PIM1
      Conserved Domains (1) summary
      pfam14962
      Location:1157
      AIF-MLS; Mitochondria localization Sequence