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    Ribosomal protein L2 family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819012, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein L2 family
    Primary source
    TAIR:AT2G44065
    Locus tag
    AT2G44065
    See related
    Araport:AT2G44065
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (18228430..18231407)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase Neighboring gene Late embryogenesis abundant protein, group 2 Neighboring gene NagB/RpiA/CoA transferase-like superfamily protein Neighboring gene ARGOS-like protein Neighboring gene Ankyrin repeat family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_129969.5
    NM_201956.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ribosomal protein L2 family
    NP_566007.1
    • Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, transferase activity; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, conserved site (InterPro:IPR022671), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG01310.1); Has 10726 Blast hits to 10726 proteins in 3680 species: Archae - 316; Bacteria - 5707; Metazoa - 478; Fungi - 286; Plants - 1243; Viruses - 0; Other Eukaryotes - 2696 (source: NCBI BLink).
    NP_973685.1
    • Ribosomal protein L2 family; FUNCTIONS IN: structural constituent of ribosome, RNA binding, transferase activity; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L2, C-terminal (InterPro:IPR022669), Ribosomal protein L2, conserved site (InterPro:IPR022671), Translation protein SH3-like, subgroup (InterPro:IPR014722), Ribosomal protein L2, bacterial-type (InterPro:IPR005880), Ribosomal protein L2 (InterPro:IPR002171); BEST Arabidopsis thaliana protein match is: ribosomal protein L2 (TAIR:ATCG01310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18228430..18231407
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337071.1 → NP_001325084.1  Ribosomal protein L2 family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A178VVW1, Q39213, Q8VZU4
      UniProtKB/TrEMBL
      A0A384KKH3, A0A7G2EJU1, Q8LCY4
      Conserved Domains (1) summary
      cl40667
      Location:59 → 196
      RplB; Ribosomal protein L2 [Translation, ribosomal structure and biogenesis]

    2. NM_201956.3 → NP_973685.1  Ribosomal protein L2 family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973685.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A178VVW1, Q39213, Q8VZU4
      UniProtKB/TrEMBL
      A0A384KKH3, A0A7G2EJU1, Q8LCY4
      Conserved Domains (1) summary
      cl40667
      Location:59 → 196
      RplB; Ribosomal protein L2 [Translation, ribosomal structure and biogenesis]

    3. NM_129969.5 → NP_566007.1  Ribosomal protein L2 family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566007.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A178VVW1, Q39213, Q8VZU4
      UniProtKB/TrEMBL
      A0A384KKH3, A0A7G2EJU1, Q8LCY4
      Conserved Domains (1) summary
      cl40667
      Location:59 → 196
      RplB; Ribosomal protein L2 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VZU4.1

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