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    Transducin/WD40 repeat-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818344, updated on 18-Sep-2024

    Summary

    Official Full Name
    Transducin/WD40 repeat-like superfamily protein
    Primary source
    TAIR:AT2G37670
    Locus tag
    AT2G37670
    See related
    Araport:AT2G37670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13M22.17; F13M22_17
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    Genomic context

    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (15797210..15800796, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Barwin-like endoglucanases superfamily protein Neighboring gene GRAS family transcription factor Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene far-red elongated hypocotyl 1 Neighboring gene glucose-induced degradation-like protein Neighboring gene phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase

    General gene information

    NM_129323.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
     
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    Transducin/WD40 repeat-like superfamily protein
    NP_181303.1
    • Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G02430.1); Has 38438 Blast hits to 23319 proteins in 700 species: Archae - 52; Bacteria - 5411; Metazoa - 15006; Fungi - 8500; Plants - 4706; Viruses - 3; Other Eukaryotes - 4760 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15797210..15800796 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336668.1NP_001323654.1  Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VTF9, A0A1P8AXU9, A0A654FAC5
      Conserved Domains (2) summary
      sd00039
      Location:409449
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:399711
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    2. NM_129323.1NP_181303.1  Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181303.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VTF9, O80935
      Conserved Domains (3) summary
      COG2319
      Location:398710
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:408448
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:398710
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...