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    ATATH8 Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818504, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATATH8
    Official Full Name
    Protein kinase superfamily protein
    Primary source
    TAIR:AT2G39190
    Locus tag
    AT2G39190
    See related
    Araport:AT2G39190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T16B24.17; T16B24_17
    Summary
    member of ATH subfamily
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    Genomic context

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    See ATATH8 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Sequence:
    Chromosome: 2; NC_003071.7 (16349968..16356097)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene CRINKLY4 related 2 Neighboring gene Seven transmembrane MLO family protein Neighboring gene Major facilitator superfamily protein Neighboring gene PATATIN-like protein 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_129476.3
    NM_129477.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Protein kinase superfamily protein
    NP_565900.1
    • ATATH8; FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24970.2); Has 9890 Blast hits to 9844 proteins in 1785 species: Archae - 124; Bacteria - 4354; Metazoa - 432; Fungi - 482; Plants - 693; Viruses - 14; Other Eukaryotes - 3791 (source: NCBI BLink).
    NP_565901.1
    • ATATH8; FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G71810.1); Has 8602 Blast hits to 8602 proteins in 1792 species: Archae - 122; Bacteria - 4346; Metazoa - 387; Fungi - 450; Plants - 638; Viruses - 14; Other Eukaryotes - 2645 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16349968..16356097
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129476.3 → NP_565900.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565900.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VVP8, A0A654F063, O80962
      Conserved Domains (1) summary
      COG0661
      Location:161 → 691
      AarF; Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport and metabolism, Signal transduction mechanisms]

    2. NM_129477.1 → NP_565901.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565901.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q94AB3
      Conserved Domains (2) summary
      COG0661
      Location:161 → 357
      AarF; Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family [Coenzyme transport and metabolism, Signal transduction mechanisms]
      cl21453
      Location:238 → 357
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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