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    RBL1 RHOMBOID-like 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817453, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RBL1
    Official Full Name
    RHOMBOID-like 1
    Primary source
    TAIR:AT2G29050
    Locus tag
    AT2G29050
    See related
    Araport:AT2G29050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATRBL1; RHOMBOID-like 1; T9I4.13; T9I4_13
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    Genomic context

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    See RBL1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (12477966..12480374)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Exostosin family protein Neighboring gene low-molecular-weight cysteine-rich 62 Neighboring gene GRAS family transcription factor Neighboring gene GRAS family transcription factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An Arabidopsis Rhomboid homolog is an intramembrane protease in plants. Kanaoka MM, et al. FEBS Lett, 2005 Oct 24. PMID 16223493
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001084504.1
    NM_128462.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RHOMBOID-like 1
    NP_001077973.1
    • RHOMBOID-like 1 (RBL1); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 4 (TAIR:AT3G53780.2); Has 5724 Blast hits to 5720 proteins in 1694 species: Archae - 148; Bacteria - 3468; Metazoa - 523; Fungi - 153; Plants - 363; Viruses - 0; Other Eukaryotes - 1069 (source: NCBI BLink).
    NP_180469.3
    • RHOMBOID-like 1 (RBL1); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: Golgi apparatus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 4 (TAIR:AT3G53780.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12477966..12480374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128462.4 → NP_180469.3  RHOMBOID-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180469.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81073, Q0WQX7, Q3C2H8
      UniProtKB/TrEMBL
      A0A178VZI3, A0A5S9X279, A0A654EYK0
      Conserved Domains (1) summary
      pfam01694
      Location:123 → 263
      Rhomboid; Rhomboid family

    2. NM_001084504.1 → NP_001077973.1  RHOMBOID-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077973.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WQX7
      Conserved Domains (1) summary
      pfam01694
      Location:124 → 291
      Rhomboid; Rhomboid family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0WQX7.1

    Gene LinkOut

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