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    cytochrome C oxidase subunit [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818460, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cytochrome C oxidase subunit
    Primary source
    TAIR:AT2G38780
    Locus tag
    AT2G38780
    See related
    Araport:AT2G38780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6A23.2; T6A23_2
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (16210816..16215521)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene annexin 3 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene uncharacterized protein Neighboring gene Plant calmodulin-binding protein-like protein Neighboring gene histone H2A 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_129435.7

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome C oxidase subunit
    NP_181412.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16210816..16215521
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336730.1 → NP_001324243.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZK2, Q56YJ0

    2. NM_001336731.1 → NP_001324253.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZJ3, Q56YJ0

    3. NM_001336732.1 → NP_001324248.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZJ2, A0A654F1F9

    4. NM_001336735.1 → NP_001324245.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZJ3, Q56YJ0

    5. NM_001336733.1 → NP_001324247.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZI1, Q56YJ0

    6. NM_001336734.1 → NP_001324246.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZJ4, A0A654F1F9

    7. NM_001336736.1 → NP_001324252.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZJ3, Q56YJ0

    8. NM_001336737.1 → NP_001324244.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZJ3, Q56YJ0

    9. NM_001336726.1 → NP_001324251.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZI4, Q56YJ0

    10. NM_001336727.1 → NP_001324250.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZJ3, Q56YJ0

    11. NM_001336729.1 → NP_001324242.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZI2, Q56YJ0

    12. NM_001336728.1 → NP_001324249.1  cytochrome C oxidase subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZI3, Q56YJ0

    13. NM_129435.7 → NP_181412.2  cytochrome C oxidase subunit [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181412.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X5B1, F4ITX5
      Conserved Domains (2) summary
      sd00006
      Location:344 → 374
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:314 → 373
      TPR_12; Tetratricopeptide repeat
    Nucleotide Protein
    Heading Accession and Version

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