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    Surfeit locus protein 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817321, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Surfeit locus protein 6
    Primary source
    TAIR:AT2G27750
    Locus tag
    AT2G27750
    See related
    Araport:AT2G27750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15K20.15; F15K20_15
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (11823916..11824461, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene copper ion binding protein Neighboring gene RAB6-interacting golgin (DUF662) Neighboring gene tRNAisopentenyltransferase 2 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Surfeit locus protein 6
    NP_180343.1
    • Surfeit locus protein 6; CONTAINS InterPro DOMAIN/s: Surfeit locus 6 (InterPro:IPR007019); BEST Arabidopsis thaliana protein match is: Surfeit locus protein 6 (TAIR:AT5G05210.1); Has 646 Blast hits to 578 proteins in 173 species: Archae - 0; Bacteria - 6; Metazoa - 188; Fungi - 142; Plants - 65; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11823916..11824461 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128334.1 → NP_180343.1  Surfeit locus protein 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180343.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EWS3, Q9ZUX6
      Conserved Domains (1) summary
      pfam04935
      Location:42 → 175
      SURF6; Surfeit locus protein 6
    Nucleotide Protein
    Heading Accession and Version

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