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    PP2-B1 phloem protein 2-B1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814754, updated on 18-Sep-2024

    Summary

    Official Symbol
    PP2-B1
    Official Full Name
    phloem protein 2-B1
    Primary source
    TAIR:AT2G02230
    Locus tag
    AT2G02230
    See related
    Araport:AT2G02230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtPP2-B1; phloem protein 2-B1; T16F16.2; T16F16_2
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    Genomic context

    See PP2-B1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (589945..591689, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene phytosulfokin receptor 1 Neighboring gene F-box family protein Neighboring gene phloem protein 2-B2

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_126283.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbohydrate binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    phloem protein 2-B1
    NP_178331.2
    • phloem protein 2-B1 (PP2-B1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G02240.1); Has 552 Blast hits to 533 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 552; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      589945..591689 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126283.5NP_178331.2  phloem protein 2-B1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178331.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6NPT8, Q9ZVR6
      UniProtKB/TrEMBL
      A0A178VT42, A0A5S9WWL0
      Conserved Domains (2) summary
      pfam00646
      Location:3073
      F-box; F-box domain
      pfam14299
      Location:122332
      PP2; Phloem protein 2