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    disease resistance protein (TIR class) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842403, updated on 18-Sep-2024

    Summary

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    Official Full Name
    disease resistance protein (TIR class)
    Primary source
    TAIR:AT1G61100
    Locus tag
    AT1G61100
    See related
    Araport:AT1G61100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F11P17.17; F11P17_17
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (22508524..22512333, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein Neighboring gene NAC domain containing protein 25

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001198347.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    disease resistance protein (TIR class)
    NP_001185276.1
    • disease resistance protein (TIR class), putative; INVOLVED IN: defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 7 (TAIR:AT4G27430.2).
    NP_176305.2
    • disease resistance protein (TIR class), putative; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 7 (TAIR:AT4G27430.2); Has 1636 Blast hits to 1307 proteins in 221 species: Archae - 4; Bacteria - 130; Metazoa - 666; Fungi - 143; Plants - 195; Viruses - 9; Other Eukaryotes - 489 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22508524..22512333 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104791.3 → NP_176305.2  disease resistance protein (TIR class) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176305.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W608, A0A654EJW8, F4HRR0

    2. NM_001198347.1 → NP_001185276.1  disease resistance protein (TIR class) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185276.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W608, A0A654EJW8, F4HRQ9
    Nucleotide Protein
    Heading Accession and Version

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