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    RHA3A RING-H2 finger A3A [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816251, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RHA3A
    Official Full Name
    RING-H2 finger A3A
    Primary source
    TAIR:AT2G17450
    Locus tag
    AT2G17450
    See related
    Araport:AT2G17450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5J6.22; RING-H2 finger A3A; RING-H2 FINGER PROTEIN RHA3A
    Summary
    Encodes a putative RING-H2 finger protein RHA3a.
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    Genomic context

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    See RHA3A in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (7576388..7577846, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Seven transmembrane MLO family protein Neighboring gene plant intracellular ras group-related LRR 5 Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene aluminum activated malate transporter family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ligand-induced monoubiquitination of BIK1 regulates plant immunity. Ma X, et al. Nature, 2020 May. PMID 32404997, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127300.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein ubiquitination IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RING-H2 finger A3A
    NP_179337.1
    • RING-H2 finger A3A (RHA3A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A3B (TAIR:AT4G35480.1); Has 9845 Blast hits to 9818 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 2501; Fungi - 735; Plants - 5213; Viruses - 41; Other Eukaryotes - 1355 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7576388..7577846 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127300.4 → NP_179337.1  RING-H2 finger A3A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179337.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22755
      UniProtKB/TrEMBL
      A0A178VZ20, A0A5S9WZ21
      Conserved Domains (2) summary
      cd00162
      Location:102 → 143
      RING_Ubox; RING-H2 finger (C3H2C3-type) [structural motif]
      cl17238
      Location:100 → 144
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O22755.1

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