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    orotidine 5'-phosphate decarboxylase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842522, updated on 18-Sep-2024

    Summary

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    Official Full Name
    orotidine 5'-phosphate decarboxylase
    Primary source
    TAIR:AT1G62250
    Locus tag
    AT1G62250
    See related
    Araport:AT1G62250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19K23.17; F19K23_17
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (22994538..22997709, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene mitochondrial editing factor 9 Neighboring gene SLAC1 homologue 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334022.1
    NM_104905.6
    NM_202341.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    orotidine 5'-phosphate decarboxylase
    NP_176415.1
    • unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_974070.1
    • unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22994538..22997709 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104905.6 → NP_176415.1  orotidine 5'-phosphate decarboxylase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176415.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WEW5, A0A5S9WRG8, O04589

    2. NM_001334022.1 → NP_001322257.1  orotidine 5'-phosphate decarboxylase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WEW5, A0A5S9WRG8, O04589

    3. NM_202341.2 → NP_974070.1  orotidine 5'-phosphate decarboxylase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974070.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WCS1, F4HX60
    Nucleotide Protein
    Heading Accession and Version

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