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    Galactose oxidase/kelch repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843069, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Galactose oxidase/kelch repeat superfamily protein
    Primary source
    TAIR:AT1G67480
    Locus tag
    AT1G67480
    See related
    Araport:AT1G67480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1F15.5; T1F15_5
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (25276183..25278780)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene Minichromosome maintenance (MCM2/3/5) family protein Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene microRNA ath-MIR839 precursor Neighboring gene glucosidase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Miscellaneous features

    • Loc: 25276892-25276904 AT1G67480.uORF1-1
    • Loc: 25276999-25277204 AT1G67480.uORF1-2
    NM_001084316.2
    NM_001334300.1
    NM_105415.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Galactose oxidase/kelch repeat superfamily protein
    NP_001077785.1
    • Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27420.1); Has 11510 Blast hits to 6062 proteins in 581 species: Archae - 21; Bacteria - 896; Metazoa - 8265; Fungi - 112; Plants - 1475; Viruses - 165; Other Eukaryotes - 576 (source: NCBI BLink).
    NP_176915.1
    • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G27420.1); Has 11510 Blast hits to 6062 proteins in 581 species: Archae - 21; Bacteria - 896; Metazoa - 8265; Fungi - 112; Plants - 1475; Viruses - 165; Other Eukaryotes - 576 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25276183..25278780
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105415.3 → NP_176915.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176915.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O64797, Q9CAG8
      UniProtKB/TrEMBL
      A0A178WJ34, A0A654ELU4
      Conserved Domains (3) summary
      PHA03098
      Location:101 → 315
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:130 → 175
      Kelch; KELCH repeat [structural motif]
      pfam00646
      Location:38 → 79
      F-box; F-box domain

    2. NM_001084316.2 → NP_001077785.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077785.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O64797, Q9CAG8
      UniProtKB/TrEMBL
      A0A178WJ34, A0A654ELU4
      Conserved Domains (3) summary
      PHA03098
      Location:101 → 315
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:130 → 175
      Kelch; KELCH repeat [structural motif]
      pfam00646
      Location:38 → 79
      F-box; F-box domain

    3. NM_001334300.1 → NP_001323370.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O64797, Q9CAG8
      UniProtKB/TrEMBL
      A0A178WJ34, A0A654ELU4
      Conserved Domains (3) summary
      PHA03098
      Location:101 → 315
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:130 → 175
      Kelch; KELCH repeat [structural motif]
      pfam00646
      Location:38 → 79
      F-box; F-box domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9CAG8.1

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