U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ATMAP65-6 Microtubule associated protein (MAP65/ASE1) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814722, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ATMAP65-6
    Official Full Name
    Microtubule associated protein (MAP65/ASE1) family protein
    Primary source
    TAIR:AT2G01910
    Locus tag
    AT2G01910
    See related
    Araport:AT2G01910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MAP65-6; T23K3.10; T23K3_10
    Summary
    Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ATMAP65-6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Sequence:
    Chromosome: 2; NC_003071.7 (416021..420661)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene DNAse I-like superfamily protein Neighboring gene cyclin J18 Neighboring gene uncharacterized protein Neighboring gene PsbQ-like 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Two microtubule-associated proteins of the Arabidopsis MAP65 family function differently on microtubules. Mao T, et al. Plant Physiol, 2005 Jun. PMID 15908607, Free PMC Article
    2. The C-terminal variable region specifies the dynamic properties of Arabidopsis microtubule-associated protein MAP65 isotypes. Smertenko AP, et al. Plant Cell, 2008 Dec. PMID 19060108, Free PMC Article
    3. Molecular dissection of plant cytokinesis and phragmoplast structure: a survey of GFP-tagged proteins. Van Damme D, et al. Plant J, 2004 Nov. PMID 15469496
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. evidence that AtMAP65-1 and AtMAP65-6, two related proteins, may regulate microtubule organization in different manners
      Title: Two microtubule-associated proteins of the Arabidopsis MAP65 family function differently on microtubules.
    Submit: New GeneRIF Correction

    General gene information

    Go to the top of the page Help
    NM_001035868.2
    NM_126252.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables microtubule binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    NOT involved_in microtubule nucleation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    NOT involved_in positive regulation of microtubule polymerization IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in phragmoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plastid HDA PubMed 
    located_in preprophase band IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Microtubule associated protein (MAP65/ASE1) family protein
    NP_001030945.1
    • ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_178300.3
    • ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 5922 Blast hits to 4912 proteins in 547 species: Archae - 118; Bacteria - 527; Metazoa - 2917; Fungi - 542; Plants - 628; Viruses - 11; Other Eukaryotes - 1179 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      416021..420661
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126252.4 → NP_178300.3  Microtubule associated protein (MAP65/ASE1) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178300.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WPU6, Q2V4B4, Q9SIS3
      UniProtKB/TrEMBL
      A0A5S9WWG7, A0A654EW60
      Conserved Domains (1) summary
      pfam03999
      Location:52 → 509
      MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)

    2. NM_001035868.2 → NP_001030945.1  Microtubule associated protein (MAP65/ASE1) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030945.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EAS5
      Conserved Domains (1) summary
      pfam03999
      Location:11 → 468
      MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SIS3.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.