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    EXL6 extracellular lipase 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843926, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EXL6
    Official Full Name
    extracellular lipase 6
    Primary source
    TAIR:AT1G75930
    Locus tag
    AT1G75930
    See related
    Araport:AT1G75930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    extracellular lipase 6; T4O12.260; T4O12_260
    Summary
    member of Lipase proteins
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    Genomic context

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    See EXL6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (28508072..28509881)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene extracellular lipase 4 Neighboring gene ncRNA Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene families from the Arabidopsis thaliana pollen coat proteome. Mayfield JA, et al. Science, 2001 Jun 29. PMID 11431566
    2. A new family of lipolytic enzymes? Upton C, et al. Trends Biochem Sci, 1995 May. PMID 7610479
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_106243.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables acyltransferase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables lipase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in extracellular region IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    extracellular lipase 6
    NP_177721.1
    • extracellular lipase 6 (EXL6); CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75920.2); Has 3271 Blast hits to 3237 proteins in 176 species: Archae - 0; Bacteria - 214; Metazoa - 0; Fungi - 35; Plants - 3013; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28508072..28509881
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106243.4 → NP_177721.1  extracellular lipase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177721.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93X94
      UniProtKB/TrEMBL
      A0A178WL29, A0A5S9WUP6
      Conserved Domains (1) summary
      cd01837
      Location:29 → 332
      SGNH_plant_lipase_like; SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93X94.1

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