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    Terpenoid synthases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842571, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Terpenoid synthases superfamily protein
    Primary source
    TAIR:AT1G62730
    Locus tag
    AT1G62730
    See related
    Araport:AT1G62730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23N19.9; F23N19_9
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (23229059..23230818, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene beta vacuolar processing enzyme Neighboring gene ncRNA Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene stress-inducible protein Neighboring gene Translation elongation factor EFG/EF2 protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001334051.1
    NM_104950.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Terpenoid synthases superfamily protein
    NP_564800.1
    • Terpenoid synthases superfamily protein; FUNCTIONS IN: transferase activity; INVOLVED IN: biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid synthase (InterPro:IPR008949), Squalene/phytoene synthase (InterPro:IPR002060); Has 1013 Blast hits to 1013 proteins in 466 species: Archae - 0; Bacteria - 638; Metazoa - 104; Fungi - 106; Plants - 45; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      23229059..23230818 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104950.4 → NP_564800.1  Terpenoid synthases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564800.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJA0, Q9SI77
      Conserved Domains (1) summary
      pfam00494
      Location:20 → 280
      SQS_PSY; Squalene/phytoene synthase

    2. NM_001334051.1 → NP_001320496.1  Terpenoid synthases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AN01, A0A7G2E5V1
      Conserved Domains (1) summary
      pfam00494
      Location:20 → 252
      SQS_PSY; Squalene/phytoene synthase
    Nucleotide Protein
    Heading Accession and Version

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