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    CSLD5 cellulose synthase-like D5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839467, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CSLD5
    Official Full Name
    cellulose synthase-like D5
    Primary source
    TAIR:AT1G02730
    Locus tag
    AT1G02730
    See related
    Araport:AT1G02730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCSLD5; CELLULOSE SYNTHASE LIKE D5; cellulose synthase-like D5; SALT OVERLY SENSITIVE 6; SOS6; T14P4.29
    Summary
    Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.
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    Genomic context

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    See CSLD5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (594502..598657, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene glycine-rich protein Neighboring gene galacturonosyltransferase 5 Neighboring gene MRG family protein Neighboring gene Drought-responsive family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis CSLD5 Functions in Cell Plate Formation in a Cell Cycle-Dependent Manner. Gu F, et al. Plant Cell, 2016 Jul. PMID 27354558, Free PMC Article
    2. A cellulose synthase-like protein is required for osmotic stress tolerance in Arabidopsis. Zhu J, et al. Plant J, 2010 Jul 1. PMID 20409003, Free PMC Article
    3. Disruption of ATCSLD5 results in reduced growth, reduced xylan and homogalacturonan synthase activity and altered xylan occurrence in Arabidopsis. Bernal AJ, et al. Plant J, 2007 Dec. PMID 17892446
    4. Mannan synthase activity in the CSLD family. Verhertbruggen Y, et al. Plant Signal Behav, 2011 Oct. PMID 21904114, Free PMC Article
    5. The cooperative activities of CSLD2, CSLD3, and CSLD5 are required for normal Arabidopsis development. Yin L, et al. Mol Plant, 2011 Nov. PMID 21471331

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data show that CSLD5 is an unstable protein that is rapidly degraded upon completion of cell division and that the protein turnover characteristics of CSLD5 are altered in ccs52a2 mutants, indicating that CSLD5 turnover may be regulated by a cell cycle-associated E3-ubiquitin ligase, the anaphase-promoting complex.
      Title: Arabidopsis CSLD5 Functions in Cell Plate Formation in a Cell Cycle-Dependent Manner.
    2. the cooperative activities of CSLD2, CSLD3, and CSLD5 are required for normal Arabidopsis development
      Title: The cooperative activities of CSLD2, CSLD3, and CSLD5 are required for normal Arabidopsis development.
    3. AtCSLD5 is not required for normal plant growth and development but has a critical role in osmotic stress tolerance.
      Title: A cellulose synthase-like protein is required for osmotic stress tolerance in Arabidopsis.
    4. Disruption of ATCSLD5 reduces xylan and homogalacturonan synthase activity and results in reduced growth.
      Title: Disruption of ATCSLD5 results in reduced growth, reduced xylan and homogalacturonan synthase activity and altered xylan occurrence in Arabidopsis.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    NM_100153.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulose synthase (UDP-forming) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glucosyltransferase activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    enables mannan synthase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell plate assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cell wall biogenesis NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in cellulose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to osmotic stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to water deprivation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within shoot system development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cellulose synthase-like D5
    NP_171773.1
    • cellulose synthase-like D5 (CSLD5); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3375 Blast hits to 3003 proteins in 709 species: Archae - 13; Bacteria - 1269; Metazoa - 102; Fungi - 19; Plants - 1879; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      594502..598657 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100153.4 → NP_171773.1  cellulose synthase-like D5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171773.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SRW9
      UniProtKB/TrEMBL
      A0A178W647, A0A384L2H6, A0A5S9S9I0, W8QPC8
      Conserved Domains (1) summary
      PLN02248
      Location:3 → 1181
      PLN02248; cellulose synthase-like protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SRW9.1

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