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    ATGA2OX1 gibberellin 2-beta-dioxygenase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844180, updated on 14-Nov-2024

    Summary

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    Official Symbol
    ATGA2OX1
    Official Full Name
    gibberellin 2-beta-dioxygenase
    Primary source
    TAIR:AT1G78440
    Locus tag
    AT1G78440
    See related
    Araport:AT1G78440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Arabidopsis thaliana gibberellin 2-oxidase 1; F3F9.5; F3F9_5; GA2OX1; gibberellin 2-oxidase 1
    Summary
    Encodes a gibberellin 2-oxidase that acts on C19 gibberellins.
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    Genomic context

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    See ATGA2OX1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (29511561..29513100, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene ROP interactive partner 2 Neighboring gene SOUL heme-binding family protein Neighboring gene SOUL heme-binding family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular cloning and functional expression of gibberellin 2- oxidases, multifunctional enzymes involved in gibberellin deactivation. Thomas SG, et al. Proc Natl Acad Sci U S A, 1999 Apr 13. PMID 10200325, Free PMC Article
    2. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_106491.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables gibberellin 2-beta-dioxygenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables gibberellin 2-beta-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in gibberellin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within gibberellin catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    gibberellin 2-beta-dioxygenase
    NP_177965.1
    • Arabidopsis thaliana gibberellin 2-oxidase 1 (ATGA2OX1); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 2-oxidase (TAIR:AT1G30040.1); Has 8410 Blast hits to 8364 proteins in 975 species: Archae - 0; Bacteria - 1063; Metazoa - 88; Fungi - 964; Plants - 4898; Viruses - 0; Other Eukaryotes - 1397 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29511561..29513100 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106491.2 → NP_177965.1  gibberellin 2-beta-dioxygenase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177965.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LEA2, Q9XFR8
      UniProtKB/TrEMBL
      A0A178WLK5, A0A5S9WVJ6, A0A654ERP4
      Conserved Domains (1) summary
      PLN02156
      Location:1 → 329
      PLN02156; gibberellin 2-beta-dioxygenase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LEA2.2

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