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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839703, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G28100
    Locus tag
    AT1G28100
    See related
    Araport:AT1G28100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13K9.27; F13K9_27
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (9801082..9804394)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene serine carboxypeptidase-like 45 Neighboring gene ubiquitin thioesterase otubain-like protein Neighboring gene Auxin-responsive GH3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The tomato mutation nxd1 reveals a gene necessary for neoxanthin biosynthesis and demonstrates that violaxanthin is a sufficient precursor for abscisic acid biosynthesis. Neuman H, et al. Plant J, 2014 Apr. PMID 24506237
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001084145.1
    NM_001084146.1
    NM_001332801.1
    NM_102575.3
    NM_179386.2
    NM_202196.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in xanthophyll biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001077614.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_001077615.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_174131.3
    • unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_849717.1
    • unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_973925.2
    • unknown protein; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9801082..9804394
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102575.3 → NP_174131.3  uncharacterized protein AT1G28100 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174131.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWB2, Q9C7E3
      UniProtKB/TrEMBL
      A0A178W9J6, A0A5S9W543, A0A654EF80

    2. NM_001084145.1 → NP_001077614.1  uncharacterized protein AT1G28100 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077614.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9W543, A0A654EF80, F4HWG6

    3. NM_179386.2 → NP_849717.1  uncharacterized protein AT1G28100 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849717.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWB2, Q9C7E3
      UniProtKB/TrEMBL
      A0A178W9J6, A0A5S9W543, A0A654EF80

    4. NM_001084146.1 → NP_001077615.1  uncharacterized protein AT1G28100 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077615.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MRP0

    5. NM_202196.3 → NP_973925.2  uncharacterized protein AT1G28100 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973925.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWB2, Q9C7E3
      UniProtKB/TrEMBL
      A0A178W9J6, A0A5S9W543, A0A654EF80

    6. NM_001332801.1 → NP_001320339.1  uncharacterized protein AT1G28100 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWB2, Q9C7E3
      UniProtKB/TrEMBL
      A0A178W9J6, A0A5S9W543, A0A654EF80
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GWB2.1

    Gene LinkOut

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