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    NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838486, updated on 18-Sep-2024

    Summary

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    Official Full Name
    NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
    Primary source
    TAIR:AT1G19040
    Locus tag
    AT1G19040
    See related
    Araport:AT1G19040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14D16.19; F14D16_19
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (6576077..6577413)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase Neighboring gene DNA repair metallo-beta-lactamase family protein Neighboring gene pseudo Neighboring gene response regulator 7 Neighboring gene hypothetical protein (DUF626)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    2. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
    NP_173338.1
    • NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 6 (TAIR:AT1G03490.1); Has 740 Blast hits to 735 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 740; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6576077..6577413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101762.2 → NP_173338.1  NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173338.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EB61, A0JQ66
      Conserved Domains (1) summary
      pfam02365
      Location:8 → 46
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version

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