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    aspartate/glutamate/uridylate kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820164, updated on 18-Sep-2024

    Summary

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    Official Full Name
    aspartate/glutamate/uridylate kinase family protein
    Primary source
    TAIR:AT3G10030
    Locus tag
    AT3G10030
    See related
    Araport:AT3G10030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (3092016..3095025, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene tRNA-Leu Neighboring gene plant/protein Neighboring gene tRNA-Arg Neighboring gene sequence-specific DNA binding transcription factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. Koroleva OA, et al. Plant J, 2005 Jan. PMID 15610358
    2. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001084660.1
    NM_111838.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables UMP kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in 'de novo' CTP biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    aspartate/glutamate/uridylate kinase family protein
    NP_001078129.1
    • aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7571 Blast hits to 7567 proteins in 2653 species: Archae - 55; Bacteria - 5664; Metazoa - 40; Fungi - 3; Plants - 363; Viruses - 0; Other Eukaryotes - 1446 (source: NCBI BLink).
    NP_566366.1
    • aspartate/glutamate/uridylate kinase family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: cellular amino acid biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), MADF domain (InterPro:IPR006578); BEST Arabidopsis thaliana protein match is: Amino acid kinase family protein (TAIR:AT3G18680.1); Has 7827 Blast hits to 7823 proteins in 2703 species: Archae - 182; Bacteria - 5697; Metazoa - 42; Fungi - 3; Plants - 388; Viruses - 0; Other Eukaryotes - 1515 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3092016..3095025 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111838.4 → NP_566366.1  aspartate/glutamate/uridylate kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566366.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VBU4, A0A384L583, Q94JR1
      Conserved Domains (2) summary
      cd04254
      Location:303 → 535
      AAK_UMPK-PyrH-Ec; UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and ...
      pfam13837
      Location:158 → 244
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

    2. NM_001084660.1 → NP_001078129.1  aspartate/glutamate/uridylate kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078129.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F5N0, Q9SR68
      Conserved Domains (2) summary
      cd04254
      Location:303 → 509
      AAK_UMPK-PyrH-Ec; UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and ...
      pfam13837
      Location:158 → 248
      Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

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