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    D111/G-patch domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820143, updated on 18-Sep-2024

    Summary

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    Official Full Name
    D111/G-patch domain-containing protein
    Primary source
    TAIR:AT3G09850
    Locus tag
    AT3G09850
    See related
    Araport:AT3G09850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (3023141..3025945, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene cell division cycle 48 Neighboring gene actin T1-like protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    NM_111820.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    D111/G-patch domain-containing protein
    NP_566359.1
    • D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain (TAIR:AT1G17070.1); Has 4043 Blast hits to 2784 proteins in 353 species: Archae - 19; Bacteria - 864; Metazoa - 1783; Fungi - 478; Plants - 347; Viruses - 9; Other Eukaryotes - 543 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3023141..3025945 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111820.3 → NP_566359.1  D111/G-patch domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566359.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9I1, A0A384L8K6, A0A7G2EKI7, Q9SF87
      Conserved Domains (2) summary
      pfam01585
      Location:736 → 780
      G-patch; G-patch domain
      cl00297
      Location:456 → 513
      R3H; R3H domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. R3H domains are found in proteins together with ATPase domains, SF1 helicase domains, SF2 DEAH helicase domains, Cys-rich ...
    Nucleotide Protein
    Heading Accession and Version

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