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    DNA ligase-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843852, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DNA ligase-like protein
    Primary source
    TAIR:AT1G75150
    Locus tag
    AT1G75150
    See related
    Araport:AT1G75150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22H5.12; F22H5_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (28204387..28208590, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 721, subfamily A, polypeptide 1 Neighboring gene uncharacterized protein Neighboring gene DUF620 family protein (DUF620) Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334676.1
    NM_001334677.1
    NM_106171.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNA ligase-like protein
    NP_001319384.1
    • unknown protein; Has 38228 Blast hits to 24529 proteins in 1168 species: Archae - 169; Bacteria - 4103; Metazoa - 14594; Fungi - 5866; Plants - 1861; Viruses - 317; Other Eukaryotes - 11318 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28204387..28208590 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334676.1 → NP_001319384.1  DNA ligase-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W6T7, F4HXG0

    2. NM_106171.3 → NP_177651.2  DNA ligase-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177651.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANP5, Q5XVF6

    3. NM_001334677.1 → NP_001320722.1  DNA ligase-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANP2, A0A654EP35
    Nucleotide Protein
    Heading Accession and Version

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