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    STT3B staurosporin and temperature sensitive 3-like b [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840312, updated on 18-Sep-2024

    Summary

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    Official Symbol
    STT3B
    Official Full Name
    staurosporin and temperature sensitive 3-like b
    Primary source
    TAIR:AT1G34130
    Locus tag
    AT1G34130
    See related
    Araport:AT1G34130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12G12.5; F12G12_5; staurosporin and temperature sensitive 3-like b
    Summary
    Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.
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    Genomic context

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    See STT3B in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (12429846..12433236)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene inositol polyphosphate 5-phosphatase I Neighboring gene poly(A) binding protein 1 Neighboring gene Pseudouridine synthase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
    2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_103136.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oligosaccharyl transferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    staurosporin and temperature sensitive 3-like b
    NP_174675.2
    • staurosporin and temperature sensitive 3-like b (STT3B); FUNCTIONS IN: oligosaccharyl transferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyl transferase, STT3 subunit (InterPro:IPR003674); BEST Arabidopsis thaliana protein match is: staurosporin and temperature sensitive 3-like A (TAIR:AT5G19690.1); Has 1054 Blast hits to 1026 proteins in 313 species: Archae - 251; Bacteria - 48; Metazoa - 304; Fungi - 138; Plants - 87; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12429846..12433236
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103136.4 → NP_174675.2  staurosporin and temperature sensitive 3-like b [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174675.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WN68, Q9FX21
      UniProtKB/TrEMBL
      A0A178WEH8, A0A5S9WLM5, W8PVA0
      Conserved Domains (2) summary
      COG1287
      Location:28 → 733
      Stt3; Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]
      pfam02516
      Location:40 → 521
      STT3; Oligosaccharyl transferase STT3 subunit
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FX21.1

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