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    Tic20-IV translocon at the inner envelope membrane of chloroplasts 20-IV [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827972, updated on 18-Sep-2024

    Summary

    Official Symbol
    Tic20-IV
    Official Full Name
    translocon at the inner envelope membrane of chloroplasts 20-IV
    Primary source
    TAIR:AT4G03320
    Locus tag
    AT4G03320
    See related
    Araport:AT4G03320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtTic20-IV; F4C21.25; F4C21_25; translocon at the inner envelope membrane of chloroplasts 20-IV
    Summary
    Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V).
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    Genomic context

    See Tic20-IV in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (1464467..1466174)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene syntaxin of plants 123 Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene ncRNA

    General gene information

    NM_116570.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein import into chloroplast stroma IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    translocon at the inner envelope membrane of chloroplasts 20-IV
    NP_192241.1
    • translocon at the inner envelope membrane of chloroplasts 20-IV (tic20-IV); LOCATED IN: integral to membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109), Chloroplast protein import component Tic20 (InterPro:IPR005691); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 20 (TAIR:AT1G04940.1); Has 86 Blast hits to 84 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1464467..1466174
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116570.5NP_192241.1  translocon at the inner envelope membrane of chloroplasts 20-IV [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192241.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZQZ9
      UniProtKB/TrEMBL
      A0A178UWG3, A0A5S9XPH3
      Conserved Domains (1) summary
      TIGR00994
      Location:1275
      3a0901s05TIC20; chloroplast protein import component, Tic20 family