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    adenosine/AMP deaminase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825826, updated on 18-Sep-2024

    Summary

    Official Full Name
    adenosine/AMP deaminase family protein
    Primary source
    TAIR:AT4G04880
    Locus tag
    AT4G04880
    See related
    Araport:AT4G04880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T4B21.20; T4B21_20
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    11
    Sequence:
    Chromosome: 4; NC_003075.7 (2464840..2467259, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DERLIN-2.2 Neighboring gene cardiolipin synthase Neighboring gene PCF11P-similar protein 4 Neighboring gene protodermal factor 2

    General gene information

    NM_001340515.1
    NM_001340516.1
    NM_116726.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables N6-methyl-AMP deaminase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables deaminase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables deaminase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within RNA catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    adenosine/AMP deaminase family protein
    NP_192397.2
    • adenosine/AMP deaminase family protein; FUNCTIONS IN: deaminase activity; INVOLVED IN: purine ribonucleoside monophosphate biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenosine/AMP deaminase (InterPro:IPR001365); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      2464840..2467259 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116726.4NP_192397.2  adenosine/AMP deaminase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192397.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LPL7, Q9M0Z1
      UniProtKB/TrEMBL
      A0A178UUV5
      Conserved Domains (1) summary
      cd00443
      Location:7344
      ADA_AMPD; Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase ...
    2. NM_001340516.1NP_001328399.1  adenosine/AMP deaminase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B4I7
    3. NM_001340515.1NP_001328400.1  adenosine/AMP deaminase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUV5, A0A1P8B4J3