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    GSL1 glucan synthase-like 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825838, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GSL1
    Official Full Name
    glucan synthase-like 1
    Primary source
    TAIR:AT4G04970
    Locus tag
    AT4G04970
    See related
    Araport:AT4G04970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGSL01; ATGSL1; GLUCAN SYNTHASE LIKE 1; GLUCAN SYNTHASE LIKE-1; glucan synthase-like 1; GSL01; T32N4.8; T32N4_8
    Summary
    encodes a gene similar to callose synthase
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    Genomic context

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    See GSL1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (2536925..2543273)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene RRM in demeter (DUF1985) Neighboring gene Concanavalin A-like lectin protein kinase family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Eukaryotic aspartyl protease family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Two callose synthases, GSL1 and GSL5, play an essential and redundant role in plant and pollen development and in fertility. Enns LC, et al. Plant Mol Biol, 2005 Jun. PMID 16021399
    2. Coordinated transcriptional regulation underlying the circadian clock in Arabidopsis. Li G, et al. Nat Cell Biol, 2011 May. PMID 21499259
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_116736.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1,3-beta-D-glucan synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables 1,3-beta-D-glucan synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in (1->3)-beta-D-glucan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within circadian rhythm IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within reproductive process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of 1,3-beta-D-glucan synthase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glucan synthase-like 1
    NP_567278.1
    • glucan synthase-like 1 (GSL1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: reproduction, 1,3-beta-glucan biosynthetic process, pollen development; LOCATED IN: 1,3-beta-glucan synthase complex, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 5 (TAIR:AT4G03550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      2536925..2543273
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116736.2 → NP_567278.1  glucan synthase-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567278.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q949N5, Q9S9U0
      UniProtKB/TrEMBL
      A0A178UZT8, A0A5S9XPV2
      Conserved Domains (2) summary
      pfam02364
      Location:870 → 1637
      Glucan_synthase; 1,3-beta-glucan synthase component
      pfam14288
      Location:158 → 270
      FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9S9U0.1

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