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    ROH1, putative (DUF793) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826732, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ROH1, putative (DUF793)
    Primary source
    TAIR:AT4G11300
    Locus tag
    AT4G11300
    See related
    Araport:AT4G11300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8L21.90; F8L21_90
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (6872151..6873689, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 Neighboring gene Peroxidase superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Papain family cysteine protease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_117201.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    ROH1, putative (DUF793)
    NP_192869.1
    • CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT4G23530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      6872151..6873689 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117201.4 → NP_192869.1  ROH1, putative (DUF793) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192869.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V1D1, A0A5S9XR94, Q9SUT1
      Conserved Domains (1) summary
      pfam05633
      Location:2 → 369
      BPS1; Protein BYPASS1-related
    Nucleotide Protein
    Heading Accession and Version

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