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    Serine/Threonine-kinase, putative (DUF1639) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827777, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Serine/Threonine-kinase, putative (DUF1639)
    Primary source
    TAIR:AT4G20300
    Locus tag
    AT4G20300
    See related
    Araport:AT4G20300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1C12.211; F1C12_211
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (10955311..10959239)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene TBP-associated factor 11 Neighboring gene uncharacterized protein Neighboring gene Peptidase M50 family protein Neighboring gene CTP synthase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_118149.4
    NM_179082.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Serine/Threonine-kinase, putative (DUF1639)
    NP_567597.2
    • Protein of unknown function (DUF1639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G55340.1); Has 598 Blast hits to 583 proteins in 86 species: Archae - 0; Bacteria - 10; Metazoa - 190; Fungi - 42; Plants - 277; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).
    NP_849413.1
    • Protein of unknown function (DUF1639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G55340.1); Has 587 Blast hits to 572 proteins in 85 species: Archae - 0; Bacteria - 8; Metazoa - 183; Fungi - 42; Plants - 277; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10955311..10959239
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118149.4 → NP_567597.2  Serine/Threonine-kinase, putative (DUF1639) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567597.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FRB6, Q8L603
      Conserved Domains (1) summary
      pfam07797
      Location:275 → 324
      DUF1639; Protein of unknown function (DUF1639)

    2. NM_179082.3 → NP_849413.1  Serine/Threonine-kinase, putative (DUF1639) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849413.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FRB6, F4JUU4
      Conserved Domains (1) summary
      pfam07797
      Location:275 → 324
      DUF1639; Protein of unknown function (DUF1639)
    Nucleotide Protein
    Heading Accession and Version

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