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    SRF8 STRUBBELIG-receptor family 8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828302, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SRF8
    Official Full Name
    STRUBBELIG-receptor family 8
    Primary source
    TAIR:AT4G22130
    Locus tag
    AT4G22130
    See related
    Araport:AT4G22130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1N20.230; F1N20_230; STRUBBELIG-receptor family 8
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    Genomic context

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    See SRF8 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    15
    Sequence:
    Chromosome: 4; NC_003075.7 (11723388..11727693)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene SCR-like 14 Neighboring gene ERD (early-responsive to dehydration stress) family protein Neighboring gene PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Neighboring gene UBA/UBX domain protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article
    2. An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Smakowska-Luzan E, et al. Nature, 2018 Jan 18. PMID 29320478, Free PMC Article
    3. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
    4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001125558.1
    NM_118334.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    STRUBBELIG-receptor family 8
    NP_001119030.1
    • STRUBBELIG-receptor family 8 (SRF8); FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 6 (TAIR:AT1G53730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_193944.2
    • STRUBBELIG-receptor family 8 (SRF8); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 6 (TAIR:AT1G53730.1); Has 157986 Blast hits to 122624 proteins in 4302 species: Archae - 115; Bacteria - 15061; Metazoa - 46349; Fungi - 9189; Plants - 68190; Viruses - 340; Other Eukaryotes - 18742 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11723388..11727693
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118334.5 → NP_193944.2  STRUBBELIG-receptor family 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193944.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65461, Q6R2J8
      UniProtKB/TrEMBL
      A0A178V0K9, A0A384KGH4, A0A7G2F6I0, C0LGR0
      Conserved Domains (4) summary
      PLN00113
      Location:75 → 694
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      cd14066
      Location:401 → 672
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      sd00033
      Location:99 → 120
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:30 → 70
      LRRNT_2; Leucine rich repeat N-terminal domain

    2. NM_001125558.1 → NP_001119030.1  STRUBBELIG-receptor family 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119030.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3H541
      Conserved Domains (3) summary
      cd14066
      Location:260 → 531
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      sd00033
      Location:4 → 27
      LRR_RI; leucine-rich repeat [structural motif]
      pfam07714
      Location:254 → 528
      Pkinase_Tyr; Protein tyrosine kinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6R2J8.1

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