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    XTH14 xyloglucan endotransglucosylase/hydrolase 14 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828687, updated on 18-Sep-2024

    Summary

    Official Symbol
    XTH14
    Official Full Name
    xyloglucan endotransglucosylase/hydrolase 14
    Primary source
    TAIR:AT4G25820
    Locus tag
    AT4G25820
    See related
    Araport:AT4G25820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATXTH14; F14M19.100; F14M19_100; XTR9; xyloglucan endotransglucosylase/hydrolase 14; xyloglucan endotransglycosylase 9
    Summary
    Encodes a xyloglucan endotransglycosylase with a clear preference for non-fucosylated xyloglucan polymer.
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    Genomic context

    See XTH14 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (13130291..13131860)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Calmodulin-binding protein Neighboring gene xyloglucan endotransglycosylase 6 Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

    General gene information

    NM_118714.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
     
    enables polysaccharide binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables xyloglucan:xyloglucosyl transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cell wall biogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in xyloglucan metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    xyloglucan endotransglucosylase/hydrolase 14
    NP_194312.1
    • xyloglucan endotransglucosylase/hydrolase 14 (XTH14); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: radicle, root; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 13 (TAIR:AT5G57540.1); Has 2269 Blast hits to 2247 proteins in 321 species: Archae - 0; Bacteria - 309; Metazoa - 0; Fungi - 454; Plants - 1389; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13130291..13131860
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118714.4NP_194312.1  xyloglucan endotransglucosylase/hydrolase 14 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194312.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZSU4
      UniProtKB/TrEMBL
      A0A178UTG4, A0A5S9XW90
      Conserved Domains (1) summary
      cd02176
      Location:25285
      GH16_XET; Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16