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    YLMG1-2 YGGT family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828912, updated on 18-Sep-2024

    Summary

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    Official Symbol
    YLMG1-2
    Official Full Name
    YGGT family protein
    Primary source
    TAIR:AT4G27990
    Locus tag
    AT4G27990
    See related
    Araport:AT4G27990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATYLMG1-2; T13J8.100; T13J8_100
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    Genomic context

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    See YLMG1-2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (13923594..13924775, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene SLAC1 homologue 2 Neighboring gene trichohyalin-like protein (DUF3444) Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. Ferro M, et al. Mol Cell Proteomics, 2003 May. PMID 12766230
    2. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
    3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    4. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118937.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope HDA PubMed 
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    YGGT family protein
    NP_194528.1
    • YLMG1-2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT3G07430.1); Has 788 Blast hits to 788 proteins in 294 species: Archae - 0; Bacteria - 510; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13923594..13924775 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118937.2 → NP_194528.1  YGGT family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194528.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBK0, Q9SUE0
      UniProtKB/TrEMBL
      A0A5S9XWH7, A0A654FTQ1
      Conserved Domains (1) summary
      pfam02325
      Location:144 → 212
      YGGT; YGGT family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SUE0.1

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