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    wall-associated kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829237, updated on 18-Sep-2024

    Summary

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    Official Full Name
    wall-associated kinase
    Primary source
    TAIR:AT4G31100
    Locus tag
    AT4G31100
    See related
    Araport:AT4G31100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6E21.20; F6E21_20
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (15123763..15126884)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Arg Neighboring gene integral membrane metal-binding family protein (DUF2296) Neighboring gene Wall-associated kinase family protein Neighboring gene DUF1997 family protein, putative (DUF1997) Neighboring gene SHK1 binding protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_119260.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    wall-associated kinase
    NP_194839.2
    • wall-associated kinase, putative; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), EGF calcium-binding (InterPro:IPR013091), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Wall-associated kinase family protein (TAIR:AT4G31110.1); Has 122281 Blast hits to 119494 proteins in 4412 species: Archae - 129; Bacteria - 13513; Metazoa - 46678; Fungi - 10143; Plants - 33595; Viruses - 489; Other Eukaryotes - 17734 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15123763..15126884
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119260.4 → NP_194839.2  wall-associated kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194839.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M092
      UniProtKB/TrEMBL
      A0A5S9XXZ0
      Conserved Domains (4) summary
      smart00221
      Location:447 → 712
      STYKc; Protein kinase; unclassified specificity
      pfam08488
      Location:197 → 305
      WAK; Wall-associated kinase
      pfam13947
      Location:39 → 143
      GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding
      cl21453
      Location:450 → 719
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M092.2

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