U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    protein serine/threonine kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824290, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    protein serine/threonine kinase
    Primary source
    TAIR:AT3G51270
    Locus tag
    AT3G51270
    See related
    Araport:AT3G51270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    15
    Sequence:
    Chromosome: 3; NC_003074.8 (19033542..19037012)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene 20S proteasome alpha subunit PAD1 Neighboring gene tRNA-Asp Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) Neighboring gene RHO-related protein from plants 1 Neighboring gene VPS35 homolog C

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001203122.1
    NM_001339496.1
    NM_001339497.1
    NM_114986.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein serine/threonine kinase
    NP_001190051.1
    • protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1).
    NP_190695.2
    • protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12271 Blast hits to 8446 proteins in 803 species: Archae - 403; Bacteria - 1376; Metazoa - 3873; Fungi - 1548; Plants - 571; Viruses - 285; Other Eukaryotes - 4215 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19033542..19037012
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203122.1 → NP_001190051.1  protein serine/threonine kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190051.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V9N6, F4J3B0
      Conserved Domains (3) summary
      COG0478
      Location:1 → 318
      RIO2; RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
      cd05144
      Location:93 → 266
      RIO2_C; C-terminal catalytic domain of the atypical protein serine kinase, RIO2 kinase
      pfam09202
      Location:8 → 89
      Rio2_N; Rio2, N-terminal

    2. NM_114986.3 → NP_190695.2  protein serine/threonine kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190695.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XJX6, F4J3A9
      Conserved Domains (3) summary
      COG0478
      Location:1 → 326
      RIO2; RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
      cd05144
      Location:93 → 274
      RIO2_C; C-terminal catalytic domain of the atypical protein serine kinase, RIO2 kinase
      pfam09202
      Location:8 → 89
      Rio2_N; Rio2, N-terminal

    3. NM_001339496.1 → NP_001326515.1  protein serine/threonine kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XJX6, F4J3A9
      Conserved Domains (3) summary
      COG0478
      Location:1 → 326
      RIO2; RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
      cd05144
      Location:93 → 274
      RIO2_C; C-terminal catalytic domain of the atypical protein serine kinase, RIO2 kinase
      pfam09202
      Location:8 → 89
      Rio2_N; Rio2, N-terminal

    4. NM_001339497.1 → NP_001326514.1  protein serine/threonine kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XJX6, F4J3A9
      Conserved Domains (3) summary
      COG0478
      Location:1 → 326
      RIO2; RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
      cd05144
      Location:93 → 274
      RIO2_C; C-terminal catalytic domain of the atypical protein serine kinase, RIO2 kinase
      pfam09202
      Location:8 → 89
      Rio2_N; Rio2, N-terminal
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools