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    DHHC-type zinc finger family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824302, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DHHC-type zinc finger family protein
    Primary source
    TAIR:AT3G51390
    Locus tag
    AT3G51390
    See related
    Araport:AT3G51390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtPAT10; PAT10; PROTEIN S-ACYL TRANSFERASE 10
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (19075544..19078120)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene IQ-domain 20 Neighboring gene hypothetical protein (DUF241) Neighboring gene ncRNA Neighboring gene hypothetical protein (DUF241)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Tonoplast-Associated Calcium-Signaling Module Dampens ABA Signaling during Stomatal Movement. Song SJ, et al. Plant Physiol, 2018 Aug. PMID 29898977, Free PMC Article
    2. A Golgi and tonoplast localized S-acyl transferase is involved in cell expansion, cell division, vascular patterning and fertility in Arabidopsis. Qi B, et al. New Phytol, 2013 Oct. PMID 23795888, Free PMC Article
    3. Protein S-ACYL Transferase10 is critical for development and salt tolerance in Arabidopsis. Zhou LZ, et al. Plant Cell, 2013 Mar. PMID 23482856, Free PMC Article
    4. S-acylation of CBL10/SCaBP8 by PAT10 is crucial for its tonoplast association and function in salt tolerance. Chai S, et al. J Integr Plant Biol, 2020 Jun. PMID 31441225
    5. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. S-acylation of CBL10/SCaBP8 by PAT10 is crucial for its tonoplast association and function in salt tolerance.
      Title: S-acylation of CBL10/SCaBP8 by PAT10 is crucial for its tonoplast association and function in salt tolerance.
    2. PAT10 role in abscisic acid sensitive stomatal movement.
      Title: A Tonoplast-Associated Calcium-Signaling Module Dampens ABA Signaling during Stomatal Movement.
    3. PAT10 loss of function caused hypersensitivity to salt stresses.
      Title: Protein S-ACYL Transferase10 is critical for development and salt tolerance in Arabidopsis.
    4. AtPAT10 is localized in the Golgi stack, trans-Golgi network/early endosome and tonoplast. Loss-of-function mutants have a pleiotropic phenotype involving cell expansion and division, vascular patterning, and fertility.
      Title: A Golgi and tonoplast localized S-acyl transferase is involved in cell expansion, cell division, vascular patterning and fertility in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_114998.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein-cysteine S-palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in plant organ development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to salt stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plant-type vacuole HDA PubMed 
    located_in plant-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DHHC-type zinc finger family protein
    NP_566950.1
    • DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G56930.1); Has 4950 Blast hits to 4948 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 685; Plants - 832; Viruses - 0; Other Eukaryotes - 1280 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19075544..19078120
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339514.1 → NP_001326942.1  DHHC-type zinc finger family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQT3
      Conserved Domains (1) summary
      pfam01529
      Location:159 → 226
      DHHC; DHHC palmitoyltransferase

    2. NM_114998.5 → NP_566950.1  DHHC-type zinc finger family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566950.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7XA86, Q8LAV8, Q9SD10
      UniProtKB/TrEMBL
      A0A178VFJ8, A0A5S9XJT9
      Conserved Domains (1) summary
      pfam01529
      Location:164 → 231
      DHHC; DHHC palmitoyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7XA86.1

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