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    DNAse I-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825499, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DNAse I-like superfamily protein
    Primary source
    TAIR:AT3G63240
    Locus tag
    AT3G63240
    See related
    Araport:AT3G63240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (23363872..23367592, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene senescence-associated-like protein (DUF581) Neighboring gene ncRNA Neighboring gene homocysteine methyltransferase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001340194.1
    NM_116189.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables inositol-polyphosphate 5-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in phosphatidylinositol dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNAse I-like superfamily protein
    NP_191883.2
    • DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 2363 Blast hits to 2040 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 600; Plants - 662; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      23363872..23367592 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116189.4 → NP_191883.2  DNAse I-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191883.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GTS0, Q9M1W5
      UniProtKB/TrEMBL
      A0A178VK24
      Conserved Domains (1) summary
      cl00490
      Location:7 → 528
      EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily

    2. NM_001340194.1 → NP_001326750.1  DNAse I-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GTS0, Q9M1W5
      UniProtKB/TrEMBL
      A0A178VK24
      Conserved Domains (1) summary
      cl00490
      Location:7 → 528
      EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GTS0.1

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