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    MOP10 Pollen Ole e 1 allergen and extensin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830433, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MOP10
    Official Full Name
    Pollen Ole e 1 allergen and extensin family protein
    Primary source
    TAIR:AT5G05500
    Locus tag
    AT5G05500
    See related
    Araport:AT5G05500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtPRPL1; MOP10.4; MOP10_4; proline-rich protein-like 1; PRPL1
    Summary
    Encodes Proline-rich protein-like PRPL1, controls elongation of root hairs.
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    Genomic context

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    See MOP10 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (1629610..1630478)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2 alpha subunit Neighboring gene Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein Neighboring gene Rad21/Rec8-like family protein Neighboring gene Mad3/BUB1 homology region 1 Neighboring gene Outer membrane OMP85 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proline-rich protein-like PRPL1 controls elongation of root hairs in Arabidopsis thaliana. Boron AK, et al. J Exp Bot, 2014 Oct. PMID 25147272, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_120632.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within root hair elongation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within unidimensional cell growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in vesicle IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Pollen Ole e 1 allergen and extensin family protein
    NP_568156.1
    • Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT2G34700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      1629610..1630478
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120632.2 → NP_568156.1  Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568156.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKN9, A0A654FYM2, Q9FFG5
      Conserved Domains (1) summary
      pfam01190
      Location:45 → 138
      Pollen_Ole_e_I; Pollen proteins Ole e I like
    Nucleotide Protein
    Heading Accession and Version

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