NFXL2 NF-X1-type zinc finger protein NFXL2 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: NFXL2
Official Full Name: NF-X1-type zinc finger protein NFXL2
Primary source: TAIR:AT5G05660
Locus tag: AT5G05660
See related: Araport:AT5G05660
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: Arabidopsis NF-X like 2; ATNFXL2; EARLY BIRD; EBI; MJJ3.6; MJJ3_6; NFX1-like 2
Summary: Encodes a homolog of the mammalian zinc finger transcription factor NF-X1.
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Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

NM_120648.6

Function	Evidence Code	Pubs
enables cis-regulatory region sequence-specific DNA binding	IDA Inferred from Direct Assay more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within circadian rhythm	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within cutin-based cuticle development	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within flower development	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within negative regulation of DNA-templated transcription	IEP Inferred from Expression Pattern more info	PubMed
acts_upstream_of_or_within positive regulation of DNA-templated transcription	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in protein ubiquitination	IEA Inferred from Electronic Annotation more info
involved_in regulation of hydrogen peroxide metabolic process	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within regulation of stomatal complex patterning	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in response to salt stress	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IDA Inferred from Direct Assay more info	PubMed
located_in nucleus	ISM Inferred from Sequence Model more info

NP_196185.4

ATNFXL2; FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: NF-X-like 1 (TAIR:AT1G10170.1); Has 10412 Blast hits to 5299 proteins in 265 species: Archae - 4; Bacteria - 94; Metazoa - 8397; Fungi - 425; Plants - 250; Viruses - 11; Other Eukaryotes - 1231 (source: NCBI BLink).

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The following sections contain reference sequences that belong to a specific genome build. Explain