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    Nucleotide-sugar transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830467, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Nucleotide-sugar transporter family protein
    Primary source
    TAIR:AT5G05820
    Locus tag
    AT5G05820
    See related
    Araport:AT5G05820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MJJ3.24; MJJ3_24
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (1751686..1754361, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene RING/FYVE/PHD zinc finger superfamily protein Neighboring gene replication factor C subunit, putative (DUF620) Neighboring gene plant intracellular ras group-related LRR 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_120664.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables organic anion transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Nucleotide-sugar transporter family protein
    NP_196201.2
    • Nucleotide-sugar transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT3G11320.1); Has 3144 Blast hits to 3139 proteins in 327 species: Archae - 14; Bacteria - 156; Metazoa - 754; Fungi - 474; Plants - 1369; Viruses - 0; Other Eukaryotes - 377 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      1751686..1754361 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120664.4 → NP_196201.2  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196201.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6DBP3, Q9FFJ6
      UniProtKB/TrEMBL
      A0A178UB06, A0A5S9Y1Q9, A0A7G2EN39
      Conserved Domains (1) summary
      cl26744
      Location:14 → 301
      TPT; Triose-phosphate Transporter family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6DBP3.1

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